Back to Enquiry Defence

HMRC R&D Enquiry Outcomes & Appeals

Understanding possible outcomes helps you prepare for different scenarios. If you disagree with HMRC's conclusion, you have formal appeal rights.

Possible Enquiry Outcomes

Enquiries can conclude in several ways, each with different implications for your business.

Full Acceptance

HMRC satisfied, claim stands as submitted

Impact: Payment released (if held), no further action

Partial Reduction

Some projects or costs disallowed

Impact: Reduced benefit, possible interest charges

Full Rejection

Entire R&D claim denied

Impact: No benefit, possible penalties, interest charges

Discovery Assessment

HMRC opens enquiries into previous years

Impact: Significant potential exposure, penalties may compound

Penalties for Incorrect Claims

HMRC penalties for incorrect R&D claims are based on the taxpayer's behaviour, as defined in Finance Act 2007, Schedule 24.

BehaviourUnprompted DisclosurePrompted Disclosure
Careless

Failure to take reasonable care, inadequate record-keeping, errors due to lack of understanding

0% – 30%15% – 30%
Deliberate

Knowingly submitting an incorrect claim, claiming ineligible projects, inflating time allocations

20% – 70%35% – 70%
Deliberate + Concealment

Deliberate inaccuracy with active concealment, creating false documentation, systematic fraud

30% – 100%50% – 100%

Disclosure Benefits: Unprompted disclosure (telling HMRC before they discover the issue) significantly reduces penalties. This is why professional advice before responding is crucial.

Reference: Finance Act 2007, Schedule 24; HMRC Compliance Handbook CH80000

Your Appeal Rights

If you disagree with HMRC's conclusions, you have formal appeal rights at three stages.

1

Internal Review

Request within 30 days of HMRC's decision. Different HMRC officer reviews the case. Free and relatively quick (typically 45 days). Does not affect right to tribunal appeal.

2

First-tier Tribunal (Tax Chamber)

Independent judicial review. Must appeal within 30 days of HMRC decision (or after internal review). Formal hearing with legal procedures. Can consider new evidence. Decision is binding (subject to further appeal).

3

Upper Tribunal

Appeals on points of law only. Permission required. More formal legal process. Can set binding precedent.

When to Appeal

Consider appealing if:

  • • HMRC has misunderstood your technical activities
  • • You have strong evidence HMRC hasn't considered
  • • The financial stakes justify the cost and time
  • • Legal precedent supports your position

Innovation Plus can advise on appeal prospects and recommend tribunal specialists if needed.

Key Tribunal Cases

Recent tribunal cases provide guidance on R&D enquiry issues. These precedents can support your position.

COLLINS CONSTRUCTION LIMITED v HMRC

[2024] UKFTT 00951 (TC)

Documentation standards, contemporaneous evidence

QUINN (LONDON) LIMITED v HMRC

[2023] UKFTT 00437 (TC)

R&D within commercial contracts

HADEE ENGINEERING CO LTD v HMRC

[2023] UKFTT 00595 (TC)

Distinguishing production from R&D

GET ONBORD LTD v HMRC

[2024] UKFTT 00155 (TC)

Software development standards

GRAZER LEARNING LIMITED v HMRC

[2023] UKFTT 00854 (TC)

Permanent beta, witness testimony

AHK RECRUITMENT LIMITED v HMRC

[2024] UKFTT 00120 (TC)

Technological uncertainty evidence

Facing an Unfavourable Outcome?

If HMRC has rejected or reduced your claim, let us review your case. We can advise on appeal prospects and next steps.